Index

C

compare_species() (in module reactome2py.analysis)

D

db_name() (in module reactome2py.analysis) db_version() (in module reactome2py.analysis) discover() (in module reactome2py.content)

disease() (in module reactome2py.content) drug_data_source() (in module reactome2py.utils) drug_targets() (in module reactome2py.utils)

E

ehld_stids() (in module reactome2py.utils) entities_complex() (in module reactome2py.content) entities_complexes() (in module reactome2py.content) entity_other_form() (in module reactome2py.content) entity_structures() (in module reactome2py.content) event_ancestors() (in module reactome2py.content)

event_species() (in module reactome2py.content) export_diagram() (in module reactome2py.content) export_document() (in module reactome2py.content) export_event() (in module reactome2py.content) export_fireworks() (in module reactome2py.content) export_reaction() (in module reactome2py.content)

F

found_entities() (in module reactome2py.analysis)

G

gene_mappings() (in module reactome2py.utils)

genelist_drug_target() (in module reactome2py.utils) genelist_fi() (in module reactome2py.utils)

I

identifier() (in module reactome2py.analysis) identifiers() (in module reactome2py.analysis) identifiers_form() (in module reactome2py.analysis) identifiers_mapping() (in module reactome2py.analysis) identifiers_mapping_form() (in module reactome2py.analysis) identifiers_mapping_url() (in module reactome2py.analysis) identifiers_url() (in module reactome2py.analysis) import_form() (in module reactome2py.analysis) import_json() (in module reactome2py.analysis) import_url() (in module reactome2py.analysis)

interactors_acc_pathways() (in module reactome2py.content) interactors_form() (in module reactome2py.content) interactors_psicquic_acc() (in module reactome2py.content) interactors_psicquic_accs() (in module reactome2py.content) interactors_psicquic_resources() (in module reactome2py.content) interactors_psicquic_url() (in module reactome2py.content) interactors_static_acc() (in module reactome2py.content) interactors_static_accs() (in module reactome2py.content) interactors_upload_content() (in module reactome2py.content) interactors_url() (in module reactome2py.content)

M

mapping() (in module reactome2py.content) module reactome2py.analysis reactome2py.content reactome2py.utils

O

orthology() (in module reactome2py.content)

orthology_events() (in module reactome2py.content)

P

participants() (in module reactome2py.content) participants_physical_entities() (in module reactome2py.content) participants_reference_entities() (in module reactome2py.content) pathway2df() (in module reactome2py.analysis) pathway_boolean_network() (in module reactome2py.utils) pathway_contained_event() (in module reactome2py.content) pathway_contained_event_atttibute() (in module reactome2py.content) pathway_drug_target() (in module reactome2py.utils)

pathway_factor_graph() (in module reactome2py.utils) pathway_fi() (in module reactome2py.utils) pathway_pe_drug_target() (in module reactome2py.utils) pathways_low_diagram() (in module reactome2py.content) pathways_low_entity() (in module reactome2py.content) pathways_top_level() (in module reactome2py.content) person_id() (in module reactome2py.content) person_name() (in module reactome2py.content)

Q

query_id() (in module reactome2py.content)

query_ids() (in module reactome2py.content)

R

reactome2py.analysis module reactome2py.content module

reactome2py.utils module references() (in module reactome2py.content) report() (in module reactome2py.analysis) result2json() (in module reactome2py.analysis)

S

sbgn_stids() (in module reactome2py.utils) schema() (in module reactome2py.content) search_diagram() (in module reactome2py.content) search_diagram_instance() (in module reactome2py.content) search_diagram_pathway_flag() (in module reactome2py.content) search_facet() (in module reactome2py.content)

search_facet_query() (in module reactome2py.content) search_fireworks() (in module reactome2py.content) search_fireworks_flag() (in module reactome2py.content) search_query() (in module reactome2py.content) search_spellcheck() (in module reactome2py.content) search_suggest() (in module reactome2py.content) species() (in module reactome2py.content)

T

token() (in module reactome2py.analysis) token_filter_species() (in module reactome2py.analysis) token_interactors() (in module reactome2py.content) token_pathway_page() (in module reactome2py.analysis) token_pathway_reactions() (in module reactome2py.analysis) token_pathway_summary() (in module reactome2py.analysis)

token_pathways_binned() (in module reactome2py.analysis) token_pathways_reactions() (in module reactome2py.analysis) token_pathways_result() (in module reactome2py.analysis) token_pathways_summary() (in module reactome2py.analysis) token_resources() (in module reactome2py.analysis) token_unfound_identifiers() (in module reactome2py.analysis)

U

unfound_entities() (in module reactome2py.analysis)